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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10946837 chr6:26540844 G/A ZNF322B chr9:99957633-99961910:- 0.43 7.51 4.33E-13 Box Plot
BLCA rs10946850 chr6:26762667 A/T ZNF322B chr9:99957633-99961910:- -0.44 -6.53 2.08E-10 Box Plot
BLCA rs10946851 chr6:26762747 T/G ZNF322B chr9:99957633-99961910:- -0.44 -6.53 2.08E-10 Box Plot
BLCA rs10959456 chr9:11012926 C/T SIRPG chr20:1609798-1638425:- 0.35 6.01 4.33E-9 Box Plot
BLCA rs10974451 chr9:4314875 A/G KIAA0020 chr9:2720469-2844241:- 0.76 7.45 6.14E-13 Box Plot
BLCA rs10974691 chr9:4636840 A/G KDM4C chr9:6720863-7175648:+ 0.79 6.22 1.32E-9 Box Plot
BLCA rs10974691 chr9:4636840 A/G KIAA0020 chr9:2720469-2844241:- 0.65 6.33 6.9E-10 Box Plot
BLCA rs10975417 chr9:6052609 C/G AK3 chr9:4709559-4742043:- -0.83 -6.4 4.45E-10 Box Plot
BLCA rs10975417 chr9:6052609 C/G CDC37L1 chr9:4679559-4708398:+ -0.71 -6.17 1.73E-9 Box Plot
BLCA rs10975417 chr9:6052609 C/G PPAPDC2 chr9:4662298-4665256:+ -0.82 -6.08 2.94E-9 Box Plot
BLCA rs10991718 chr9:93716118 A/G C9orf156 chr9:100666771-100684852:- -0.69 -6.15 1.92E-9 Box Plot
BLCA rs11006039 chr10:59825472 C/T NRBF2 chr10:64893007-64914791:+ 0.56 5.99 4.97E-9 Box Plot
BLCA rs11010640 chr10:36648746 A/G ZNF248 chr10:38065454-38147034:- 0.74 7.29 1.79E-12 Box Plot
BLCA rs11014312 chr10:25229083 A/T PRCP chr11:82534544-82681626:- 0.56 5.99 4.87E-9 Box Plot
BLCA rs11021876 chr11:11509885 C/T COPB1 chr11:14464986-14521573:- -0.59 -6.16 1.86E-9 Box Plot